PlotUtils

Plotting routines for ClearMap based on matplotlib.

Note

This module is using matplotlib.

plot_curve(coordinates, **kwargs)

Plot a curve in 3d.

Arguments

coordinatesnx3 array.

The coordinates of the curve.

kwargs

Matplotlib parameter.

Returns

axax

3d axes object.

plot_density(points, plot_points=True, plot_contour=True, plot_contour_lines=10, n_bins=100, color=None, cmap=<matplotlib.colors.LinearSegmentedColormap object>, xlim=None, ylim=None, verbose=False)

Plot point distributions.

subplot_tiling(n, tiling=None)

Finds a good tiling to arrange subplots.

Arguments

nint

Number of subplots.

tilingNone, ‘automatic, int or tuple

The tiling to use. If None or ‘automatic’ calculate automatically. If number use this for the number of subplots along the horizontal axis. If tuple, (nx,ny) nx and ny can be numbes or None to indicate the number of sub-plots in each axis. Iif one of them is None, it will be determined automatically to fit the total number of plots.

Returns

tilingtuple of int

The subplot tiling.