Python Module Index

a | c | e | i | p | s | t | u | v


	a
	`ClearMap.Alignment`
	`ClearMap.Alignment.Annotation`
	`ClearMap.Alignment.Elastix`
	`ClearMap.Alignment.Resampling`
	`ClearMap.Alignment.Stitching`
	`ClearMap.Alignment.Stitching.StitchingRigid`
	`ClearMap.Alignment.Stitching.StitchingWobbly`
	`ClearMap.Alignment.Stitching.Tracking`
	`ClearMap.Analysis`
	`ClearMap.Analysis.Curves`
	`ClearMap.Analysis.Curves.Extrapolation`
	`ClearMap.Analysis.Curves.Resampling`
	`ClearMap.Analysis.DimensionReduction`
	`ClearMap.Analysis.Graphs`
	`ClearMap.Analysis.Graphs.Graph`
	`ClearMap.Analysis.Graphs.GraphGt`
	`ClearMap.Analysis.Graphs.GraphProcessing`
	`ClearMap.Analysis.Graphs.GraphRendering`
	`ClearMap.Analysis.Measurements`
	`ClearMap.Analysis.Measurements.MaximaDetection`
	`ClearMap.Analysis.Measurements.MeasureExpression`
	`ClearMap.Analysis.Measurements.MeasureRadius`
	`ClearMap.Analysis.Measurements.ShapeDetection`
	`ClearMap.Analysis.Measurements.Voxelization`
	`ClearMap.Analysis.Statistics`
	`ClearMap.Analysis.Statistics.GroupStatistics`
	`ClearMap.Analysis.Statistics.MultipleComparisonCorrection`
	`ClearMap.Analysis.Statistics.StatisticalTests`

	c
	`ClearMap`
	`ClearMap.Compile`

	e
	`ClearMap.Environment`
	`ClearMap.External`
	`ClearMap.External.pickle_python_3`
	`ClearMap.External.utils`

	i
	`ClearMap.ImageProcessing`
	`ClearMap.ImageProcessing.Binary`
	`ClearMap.ImageProcessing.Binary.Filling`
	`ClearMap.ImageProcessing.Binary.Smoothing`
	`ClearMap.ImageProcessing.Clipping`
	`ClearMap.ImageProcessing.Clipping.Clipping`
	`ClearMap.ImageProcessing.Differentiation`
	`ClearMap.ImageProcessing.Differentiation.Gradient`
	`ClearMap.ImageProcessing.Differentiation.Hessian`
	`ClearMap.ImageProcessing.Experts`
	`ClearMap.ImageProcessing.Experts.Cells`
	`ClearMap.ImageProcessing.Experts.Vasculature`
	`ClearMap.ImageProcessing.Filter`
	`ClearMap.ImageProcessing.Filter.FilterKernel`
	`ClearMap.ImageProcessing.Filter.Rank`
	`ClearMap.ImageProcessing.Filter.Rank.Bilateral`
	`ClearMap.ImageProcessing.Filter.Rank.Parametric`
	`ClearMap.ImageProcessing.Filter.Rank.Percentile`
	`ClearMap.ImageProcessing.Filter.Rank.Rank`
	`ClearMap.ImageProcessing.Filter.Rank.RankResample`
	`ClearMap.ImageProcessing.Filter.StructureElement`
	`ClearMap.ImageProcessing.GreyReconstruction`
	`ClearMap.ImageProcessing.IlluminationCorrection`
	`ClearMap.ImageProcessing.LightsheetCorrection`
	`ClearMap.ImageProcessing.LocalStatistics`
	`ClearMap.ImageProcessing.MachineLearning`
	`ClearMap.ImageProcessing.MachineLearning.Torch`
	`ClearMap.ImageProcessing.MachineLearning.VesselFilling`
	`ClearMap.ImageProcessing.MachineLearning.VesselFilling.VesselFilling`
	`ClearMap.ImageProcessing.MachineLearning.VesselFilling.VesselFillingNetwork`
	`ClearMap.ImageProcessing.Skeletonization`
	`ClearMap.ImageProcessing.Skeletonization.PK12`
	`ClearMap.ImageProcessing.Skeletonization.Skeletonization`
	`ClearMap.ImageProcessing.Skeletonization.SkeletonProcessing`
	`ClearMap.ImageProcessing.Thresholding`
	`ClearMap.ImageProcessing.Thresholding.Thresholding`
	`ClearMap.ImageProcessing.Topology`
	`ClearMap.ImageProcessing.Topology.Topology2d`
	`ClearMap.ImageProcessing.Topology.Topology3d`
	`ClearMap.ImageProcessing.Tracing`
	`ClearMap.ImageProcessing.Tracing.Connect`
	`ClearMap.ImageProcessing.Tracing.Trace`
	`ClearMap.IO`
	`ClearMap.IO.CSV`
	`ClearMap.IO.FileList`
	`ClearMap.IO.FileUtils`
	`ClearMap.IO.GT`
	`ClearMap.IO.IO`
	`ClearMap.IO.MHD`
	`ClearMap.IO.MMP`
	`ClearMap.IO.NPY`
	`ClearMap.IO.NRRD`
	`ClearMap.IO.Slice`
	`ClearMap.IO.SMA`
	`ClearMap.IO.Source`
	`ClearMap.IO.Temporary`
	`ClearMap.IO.TIF`
	`ClearMap.IO.Workspace`

	p
	`ClearMap.ParallelProcessing`
	`ClearMap.ParallelProcessing.Block`
	`ClearMap.ParallelProcessing.BlockProcessing`
	`ClearMap.ParallelProcessing.DataProcessing`
	`ClearMap.ParallelProcessing.DataProcessing.ArrayProcessing`
	`ClearMap.ParallelProcessing.DataProcessing.ConvolvePointList`
	`ClearMap.ParallelProcessing.DataProcessing.DevolvePointList`
	`ClearMap.ParallelProcessing.DataProcessing.MeasurePointList`
	`ClearMap.ParallelProcessing.DataProcessing.StatisticsPointList`
	`ClearMap.ParallelProcessing.ParallelTraceback`
	`ClearMap.ParallelProcessing.ProcessWriter`
	`ClearMap.ParallelProcessing.SharedMemoryArray`
	`ClearMap.ParallelProcessing.SharedMemoryManager`

	s
	`ClearMap.Scripts`
	`ClearMap.Scripts.CellMap`
	`ClearMap.Scripts.TubeMap`
	`ClearMap.Settings`

	t
	`ClearMap.Tests`
	`ClearMap.Tests.Files`

	u
	`ClearMap.Utils`
	`ClearMap.Utils.Formatting`
	`ClearMap.Utils.HierarchicalDict`
	`ClearMap.Utils.Lazy`
	`ClearMap.Utils.RegularExpression`
	`ClearMap.Utils.Sound`
	`ClearMap.Utils.TagExpression`
	`ClearMap.Utils.Timer`

	v
	`ClearMap.Visualization`
	`ClearMap.Visualization.Color`
	`ClearMap.Visualization.Matplotlib`
	`ClearMap.Visualization.Matplotlib.PlotUtils`
	`ClearMap.Visualization.Mesh`
	`ClearMap.Visualization.Mesh.IcoSphere`
	`ClearMap.Visualization.Plot3d`
	`ClearMap.Visualization.Qt`
	`ClearMap.Visualization.Qt.DataViewer`
	`ClearMap.Visualization.Qt.Plot3d`
	`ClearMap.Visualization.Qt.Utils`
	`ClearMap.Visualization.Vispy`
	`ClearMap.Visualization.Vispy.GraphVisual`
	`ClearMap.Visualization.Vispy.Plot3d`
	`ClearMap.Visualization.Vispy.PlotGraph3d`
	`ClearMap.Visualization.Vispy.TurntableCamera`
	`ClearMap.Visualization.Vispy.VolumeVisual`

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Python Module Index