All modules for which code is available

• ClearMap.Alignment.Elastix
• ClearMap.Alignment.Resampling
• ClearMap.Analysis.Label
• ClearMap.Analysis.Statistics
• ClearMap.Analysis.Tools.Extrapolate
• ClearMap.Analysis.Tools.MultipleComparisonCorrection
• ClearMap.Analysis.Tools.StatisticalTests
• ClearMap.Analysis.Voxelization
• ClearMap.IO.CSV
• ClearMap.IO.FileList
• ClearMap.IO.IO
• ClearMap.IO.Imaris
• ClearMap.IO.NPY
• ClearMap.IO.NRRD
• ClearMap.IO.RAW
• ClearMap.IO.TIF
• ClearMap.IO.VTK
• ClearMap.ImageProcessing.BackgroundRemoval
• ClearMap.ImageProcessing.CellDetection
• ClearMap.ImageProcessing.CellSizeDetection
• ClearMap.ImageProcessing.Filter.Convolution
• ClearMap.ImageProcessing.Filter.DoGFilter
• ClearMap.ImageProcessing.Filter.FilterKernel
• ClearMap.ImageProcessing.Filter.LinearFilter
• ClearMap.ImageProcessing.Filter.StructureElement
• ClearMap.ImageProcessing.GreyReconstruction
• ClearMap.ImageProcessing.IlastikClassification
• ClearMap.ImageProcessing.IlluminationCorrection
• ClearMap.ImageProcessing.ImageStatistics
• ClearMap.ImageProcessing.MaximaDetection
• ClearMap.ImageProcessing.SpotDetection
• ClearMap.ImageProcessing.StackProcessing
• ClearMap.Settings
• ClearMap.Utils.ParameterTools
• ClearMap.Utils.ProcessWriter
• ClearMap.Utils.Timer
• ClearMap.Visualization.Plot
• namedtuple_LabelRecord